Uses of Interface
de.uni_trier.wi2.procake.similarity.nest.sequence.utils.MatrixPath

Packages that use MatrixPath

Package	Description
de.uni_trier.wi2.procake.similarity.nest.sequence.utils
de.uni_trier.wi2.procake.similarity.nest.sequence.utils.impl

Uses of MatrixPath in de.uni_trier.wi2.procake.similarity.nest.sequence.utils

Methods in de.uni_trier.wi2.procake.similarity.nest.sequence.utils that return MatrixPath

Modifier and Type	Method	Description
MatrixPath	ScoringMatrix.backtrackFrom(int queryIdx, int caseIdx)	Create the alignment path of this scoring matrix.
MatrixPath	ScoringMatrix.backtrackFrom(MatrixPath.MatrixCellPair cell)	Create the alignment path of this scoring matrix.
MatrixPath	DP.getAssignments()	Returns the found assignments of the dp algorithm.
MatrixPath	MatrixPath.reverse()	Reverse the entries in this path.

Uses of MatrixPath in de.uni_trier.wi2.procake.similarity.nest.sequence.utils.impl

Classes in de.uni_trier.wi2.procake.similarity.nest.sequence.utils.impl that implement MatrixPath

Modifier and Type	Class	Description
class	MatrixPathImpl	Class representing a path through a matrix.

Fields in de.uni_trier.wi2.procake.similarity.nest.sequence.utils.impl declared as MatrixPath

Modifier and Type	Field	Description
protected MatrixPath	DPImpl.alignmentPath	The alignment path found by the dp algorithm.

Methods in de.uni_trier.wi2.procake.similarity.nest.sequence.utils.impl that return MatrixPath

Modifier and Type	Method	Description
MatrixPath	ScoringMatrixImpl.backtrackFrom(int queryIdx, int caseIdx)
MatrixPath	ScoringMatrixImpl.backtrackFrom(MatrixPath.MatrixCellPair cell)
MatrixPath	DPImpl.getAssignments()
MatrixPath	MatrixPathImpl.reverse()